Packages such as ComplexHeatMap packages and Cairo can not be installed.
So it is still not a very good way of installing R. Note: You can not update R-packages installed through r-essentials especially rcurl. Mamba install -c conda-forge r-essentials Install R mamba create -n R -c conda-forge r-base -y
I usually set the conda-forge and bioconda channels to allow for downloading up-to-date biology software. Install Mamba conda install mamba -n base -c conda-forge -y & chmod +x miniconda.sh & bash miniconda.sh -b -p minicondaĮxport PATH=$base_dir/miniconda/bin:$PATHĮcho -e "$base_dir/miniconda/etc/profile.d/conda.sh" > ~/.profile For working with larger environments I’ve noticed tasks that would take tens of minutes only takes minutes now (if not less). Mamba is an almost complete rewrite of conda in C++, allows for parallel downloading of data, and has faster (and better) dependency resolving.
With time as my friend, i learned the hard way that conda-forge is more reliable than installing from private repositories as it is tested and reviewed thoroughly by the Conda team. Given the fact that Rstudio will downgrade your R versions causes more problems than solutions. The more i used conda, i learned that installing R and maintaining the different versions are too much complicated.
0 kommentar(er)
